Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RREB1Ras responsive element binding protein 1. (1733 aa)    
Predicted Functional Partners:
ENSCAPP00000015419
annotation not available
    
 
 0.990
KDM1A
Lysine demethylase 1A.
    
 0.966
ENSCAPP00000007369
annotation not available
    
 
 0.941
HDAC1
Histone deacetylase 1.
    
 0.923
HDAC2
Histone deacetylase 2.
    
  0.867
RCOR1
REST corepressor 1.
    
 0.865
ZMYM2
Zinc finger MYM-type containing 2.
    
 0.859
RCOR3
REST corepressor 3.
    
 0.820
FOSL2
FOS like 2, AP-1 transcription factor subunit.
    
 0.800
FOS
Fos proto-oncogene, AP-1 transcription factor subunit.
    
  0.791
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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