STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VPS45Vacuolar protein sorting 45 homolog. (368 aa)    
Predicted Functional Partners:
STX16
Syntaxin 16.
    
 0.999
VTI1A
Vesicle transport through interaction with t-SNAREs 1A.
   
 0.996
STX6
Syntaxin 6.
    
 0.994
ENSCAPP00000011016
annotation not available
    
 0.980
VTI1B
Vesicle transport through interaction with t-SNAREs 1B.
   
 0.980
STX5
Syntaxin 5.
     
 0.963
STX18
Syntaxin 18.
     
 0.957
NAPA
NSF attachment protein alpha.
    
 0.949
NAPB
NSF attachment protein beta.
    
 0.949
GOSR1
Golgi SNAP receptor complex member 1.
     
 0.937
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.