STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CYGBCytoglobin. (168 aa)    
Predicted Functional Partners:
SERPING1
Serpin family G member 1.
   
    0.995
ENSCAPP00000012574
annotation not available
      
 0.949
CYB5B
Cytochrome b5 type B.
   
 
 0.907
NGB
Neuroglobin.
      
 0.839
APAF1
Apoptotic peptidase activating factor 1.
     
 0.817
EPOR
Erythropoietin receptor.
   
  
 0.762
CYB5A
Cytochrome b5 type A.
   
 
 0.755
DDI1
DNA damage inducible 1 homolog 1.
    
 
 0.739
HIF1A
Hypoxia inducible factor 1 subunit alpha.
      
 0.716
ENSCAPP00000005171
annotation not available
      
 0.692
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.