Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CHODLChondrolectin. (220 aa)    
Predicted Functional Partners:
TNC
Tenascin C.
    
  0.692
TNR
Tenascin R.
    
  0.692
TNN
Tenascin N.
    
  0.692
CALB2
Calbindin 2.
    
 0.608
TRARG1
Trafficking regulator of GLUT4 (SLC2A4) 1.
    
 0.607
XIRP2
Xin actin binding repeat containing 2.
    
 0.554
TMPRSS15
Transmembrane serine protease 15.
    
 0.541
SNAP47
Synaptosome associated protein 47.
    
 0.533
ENSCAPP00000007862
annotation not available
    
 0.529
VIPR2
Vasoactive intestinal peptide receptor 2.
      
 0.527
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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