STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000001550annotation not available (103 aa)    
Predicted Functional Partners:
HAT1
Histone acetyltransferase 1.
    
 0.999
MYSM1
Myb like, SWIRM and MPN domains 1.
    
 0.997
H2AZ2
H2A.Z variant histone 2.
 
 
 0.993
MACROH2A2
macroH2A.2 histone.
 
 
 0.989
MACROH2A1
macroH2A.1 histone.
 
 
 0.989
GLYR1
Glyoxylate reductase 1 homolog.
    
 
 0.989
LEO1
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
 
 0.988
SSRP1
Structure specific recognition protein 1.
    
 0.986
ORC1
Origin recognition complex subunit 1.
    
 0.984
SUPT16H
SPT16 homolog, facilitates chromatin remodeling subunit.
    
 0.984
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.