Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CADM4Cell adhesion molecule 4. (380 aa)    
Predicted Functional Partners:
APBB1IP
Amyloid beta precursor protein binding family B member 1 interacting protein.
     
 0.705
HEPACAM2
HEPACAM family member 2.
    
  0.651
ENPP5
Ectonucleotide pyrophosphatase/phosphodiesterase family member 5.
     
 0.612
ENSCAPP00000012236
annotation not available
    
 
 0.602
NTNG1
Netrin G1.
    
 0.588
PTPRU
Protein tyrosine phosphatase receptor type U.
    
 0.587
ENSCAPP00000004291
annotation not available
    
 0.581
C2CD2
C2 calcium dependent domain containing 2.
      
 0.571
PLA2G4A
Phospholipase A2 group IVA.
     
  0.550
ACSF2
acyl-CoA synthetase family member 2.
     
 0.548
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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