FGB protein (Cavia aperea) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

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[Homology]

Score

FGB

Fibrinogen beta chain. (476 aa)

Predicted Functional Partners:

FGG

0.999

ENSCAPP00000014476

0.999

F2

0.995

FGL1

0.993

PLG

0.985

FN1

0.982

SERPINF2

0.971

SERPINC1

0.967

THBS1

0.959

ENSCAPP00000017807

0.953

Your Current Organism:

Cavia aperea

NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSCAPP00000014476	ENSCAPP00000017807	ENSCAPP00000014476	ENSCAPP00000017807	annotation not available	annotation not available	0.983
ENSCAPP00000014476	F2	ENSCAPP00000014476	ENSCAPP00000013583	annotation not available	Coagulation factor II, thrombin.	0.998
ENSCAPP00000014476	FGB	ENSCAPP00000014476	ENSCAPP00000001554	annotation not available	Fibrinogen beta chain.	0.999
ENSCAPP00000014476	FGG	ENSCAPP00000014476	ENSCAPP00000005816	annotation not available	Fibrinogen gamma chain.	0.999
ENSCAPP00000014476	FGL1	ENSCAPP00000014476	ENSCAPP00000016839	annotation not available	Fibrinogen like 1.	0.979
ENSCAPP00000014476	FN1	ENSCAPP00000014476	ENSCAPP00000003194	annotation not available	Fibronectin 1.	0.968
ENSCAPP00000014476	PLG	ENSCAPP00000014476	ENSCAPP00000013353	annotation not available	Plasminogen.	0.983
ENSCAPP00000014476	SERPINC1	ENSCAPP00000014476	ENSCAPP00000014199	annotation not available	Serpin family C member 1.	0.966
ENSCAPP00000014476	SERPINF2	ENSCAPP00000014476	ENSCAPP00000002589	annotation not available	Serpin family F member 2.	0.987
ENSCAPP00000014476	THBS1	ENSCAPP00000014476	ENSCAPP00000002104	annotation not available	Thrombospondin 1.	0.961
ENSCAPP00000017807	ENSCAPP00000014476	ENSCAPP00000017807	ENSCAPP00000014476	annotation not available	annotation not available	0.983
ENSCAPP00000017807	F2	ENSCAPP00000017807	ENSCAPP00000013583	annotation not available	Coagulation factor II, thrombin.	0.981
ENSCAPP00000017807	FGB	ENSCAPP00000017807	ENSCAPP00000001554	annotation not available	Fibrinogen beta chain.	0.953
ENSCAPP00000017807	FGG	ENSCAPP00000017807	ENSCAPP00000005816	annotation not available	Fibrinogen gamma chain.	0.952
ENSCAPP00000017807	FGL1	ENSCAPP00000017807	ENSCAPP00000016839	annotation not available	Fibrinogen like 1.	0.590
ENSCAPP00000017807	FN1	ENSCAPP00000017807	ENSCAPP00000003194	annotation not available	Fibronectin 1.	0.458
ENSCAPP00000017807	PLG	ENSCAPP00000017807	ENSCAPP00000013353	annotation not available	Plasminogen.	0.953
ENSCAPP00000017807	SERPINC1	ENSCAPP00000017807	ENSCAPP00000014199	annotation not available	Serpin family C member 1.	0.866
ENSCAPP00000017807	SERPINF2	ENSCAPP00000017807	ENSCAPP00000002589	annotation not available	Serpin family F member 2.	0.817
F2	ENSCAPP00000014476	ENSCAPP00000013583	ENSCAPP00000014476	Coagulation factor II, thrombin.	annotation not available	0.998