STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000001556annotation not available (74 aa)    
Predicted Functional Partners:
SETDB1
SET domain bifurcated histone lysine methyltransferase 1.
   
 0.974
ENSCAPP00000013575
annotation not available
   
 0.955
ARL14EP
ADP ribosylation factor like GTPase 14 effector protein.
    
 
 0.888
ARL14EPL
ADP ribosylation factor like GTPase 14 effector protein like.
    
 
 0.853
ENSCAPP00000013457
annotation not available
    
 0.807
C1QC
Complement C1q C chain.
    
 0.688
TEP1
Telomerase associated protein 1.
   
 0.678
PPP1R10
Protein phosphatase 1 regulatory subunit 10.
    
 0.651
MYSM1
Myb like, SWIRM and MPN domains 1.
   
 0.630
ENSCAPP00000015240
annotation not available
   
  0.588
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.