STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCDC149Coiled-coil domain containing 149. (329 aa)    
Predicted Functional Partners:
IQCA1
IQ motif containing with AAA domain 1.
      
 0.878
ENSCAPP00000012574
annotation not available
      
 0.876
SLC36A1
Solute carrier family 36 member 1.
      
 0.851
ENSCAPP00000004969
annotation not available
      
 0.760
CCDC125
Coiled-coil domain containing 125.
      
 0.688
ZBTB49
Zinc finger and BTB domain containing 49.
      
 0.661
PCDH15
Protocadherin related 15.
      
 0.658
GID8
GID complex subunit 8 homolog.
    
   0.646
SEPSECS
Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase.
      
 0.578
ENSCAPP00000014378
annotation not available
      
 0.574
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.