Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TAL2TAL bHLH transcription factor 2. (108 aa)    
Predicted Functional Partners:
LMO2
LIM domain only 2.
    
 0.908
ENSCAPP00000011786
annotation not available
    
 0.891
TCF4
Transcription factor 4.
    
 0.891
TCF3
Transcription factor 3.
    
 0.858
LMO1
LIM domain only 1.
    
 0.682
NPBWR2
Neuropeptides B and W receptor 2.
      
 0.593
LMO3
LIM domain only 3.
    
 0.571
ENSCAPP00000007441
annotation not available
      
 0.570
LDB2
LIM domain binding 2.
    
 0.568
LDB1
LIM domain binding 1.
    
 0.568
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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