Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ZNF638Zinc finger protein 638. (1346 aa)    
Predicted Functional Partners:
ENSCAPP00000000576
annotation not available
    
  0.562
ENSCAPP00000004781
annotation not available
    
  0.562
CNTF
Ciliary neurotrophic factor.
    
  0.539
ENSCAPP00000000272
annotation not available
  
  
  0.523
LIF
LIF interleukin 6 family cytokine.
    
 0.523
CLCF1
Cardiotrophin like cytokine factor 1.
    
  0.516
TADA3
Transcriptional adaptor 3.
    
 0.504
IL6ST
Interleukin 6 signal transducer.
    
  0.494
TAF12
TATA-box binding protein associated factor 12.
    
 0.485
ENSCAPP00000007075
annotation not available
    
 0.485
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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