STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SORCS2Sortilin related VPS10 domain containing receptor 2. (1072 aa)    
Predicted Functional Partners:
NGF
Nerve growth factor.
    
 
 0.962
NGFR
Nerve growth factor receptor.
    
 0.840
VPS35
VPS35 retromer complex component.
    
 
 0.727
HIVEP2
HIVEP zinc finger 2.
    
 
 0.699
CMIP
c-Maf inducing protein.
      
 0.667
ABLIM2
Actin binding LIM protein family member 2.
      
 0.667
GAK
Cyclin G associated kinase.
     
 0.656
CLTC
Clathrin heavy chain.
    
 0.652
APLP1
Amyloid beta precursor like protein 1.
    
 0.649
SLC24A4
Solute carrier family 24 member 4.
      
 0.633
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.