STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UBE2BUbiquitin conjugating enzyme E2 B. (80 aa)    
Predicted Functional Partners:
ENSCAPP00000002614
annotation not available
   
 0.999
UBE2V1
Ubiquitin conjugating enzyme E2 V1.
   
 0.999
RAD18
RAD18 E3 ubiquitin protein ligase.
    
 0.998
RNF20
Ring finger protein 20.
    
 0.995
RNF40
Ring finger protein 40.
    
 0.995
LEO1
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
 0.988
UBE2V2
Ubiquitin conjugating enzyme E2 V2.
   
 0.978
PCNA
Proliferating cell nuclear antigen.
   
 0.950
ENSCAPP00000008620
annotation not available
    
 0.948
UBR2
Ubiquitin protein ligase E3 component n-recognin 2.
    
 0.948
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.