STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ADAMTS14ADAM metallopeptidase with thrombospondin type 1 motif 14. (1192 aa)    
Predicted Functional Partners:
SGPL1
Sphingosine-1-phosphate lyase 1.
      
 0.663
SVEP1
Sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1.
   
 0.638
ENSCAPP00000006605
annotation not available
    
 0.628
COL19A1
Collagen type XIX alpha 1 chain.
    
 0.606
ZNF646
Zinc finger protein 646.
      
 0.574
LOXL3
Lysyl oxidase like 3.
   
 0.573
PALD1
Phosphatase domain containing paladin 1.
      
 0.567
CX3CL1
C-X3-C motif chemokine ligand 1.
    
 0.566
ENSCAPP00000010493
annotation not available
   
 
 0.537
ADAMTS16
ADAM metallopeptidase with thrombospondin type 1 motif 16.
     
 0.535
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.