STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADAMTS14ADAM metallopeptidase with thrombospondin type 1 motif 14. (1192 aa)    
Predicted Functional Partners:
SVEP1
Sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1.
   
 0.568
ENSCAPP00000006605
annotation not available
    
 0.558
CCBE1
Collagen and calcium binding EGF domains 1.
      
 0.520
COL5A2
Collagen type V alpha 2 chain.
   
 0.513
B3GLCT
Beta 3-glucosyltransferase.
    
 0.508
COL1A2
Collagen type I alpha 2 chain.
   
 0.505
ENSCAPP00000016172
annotation not available
   
 0.492
COL2A1
Collagen type II alpha 1 chain.
   
  0.490
COL3A1
Collagen type III alpha 1 chain.
   
  0.490
POFUT2
Protein O-fucosyltransferase 2.
     
 0.438
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.