Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SH3BP5LSH3 binding domain protein 5 like. (389 aa)    
Predicted Functional Partners:
CLSTN3
Calsyntenin 3.
      
 0.869
SNCAIP
Synuclein alpha interacting protein.
    
 
 0.865
ENSCAPP00000016826
annotation not available
      
 0.822
CDH18
Cadherin 18.
      
 0.722
PLA2G6
Phospholipase A2 group VI.
   
  
 0.696
ANTXR1
ANTXR cell adhesion molecule 1.
      
 0.688
TNKS2
Tankyrase 2.
    
 
 0.684
ENSCAPP00000005436
annotation not available
    
 
 0.678
ENSCAPP00000006409
annotation not available
    
 
 0.678
TNKS
Tankyrase.
    
 
 0.665
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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