Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000001616annotation not available (114 aa)    
Predicted Functional Partners:
PACSIN1
Protein kinase C and casein kinase substrate in neurons 1.
    
  0.992
PACSIN2
Protein kinase C and casein kinase substrate in neurons 2.
    
  0.984
ENSCAPP00000004891
annotation not available
    
 
 0.964
COBLL1
Cordon-bleu WH2 repeat protein like 1.
    
 
 0.959
ANLN
Anillin actin binding protein.
    
   0.877
RAI14
Retinoic acid induced 14.
    
 
 0.849
WASL
WASP like actin nucleation promoting factor.
    
 
 0.846
ENSCAPP00000014081
annotation not available
    
   0.840
ADAM15
ADAM metallopeptidase domain 15.
    
 
 0.823
FCHO1
FCH and mu domain containing endocytic adaptor 1.
     
 0.758
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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