Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C5orf24Chromosome 5 open reading frame 24. (188 aa)    
Predicted Functional Partners:
STRADA
STE20 related adaptor alpha.
    
   0.939
PKNOX2
PBX/knotted 1 homeobox 2.
    
   0.816
STRADB
STE20 related adaptor beta.
    
   0.802
ENSCAPP00000000380
annotation not available
    
   0.625
ENSCAPP00000003502
annotation not available
    
   0.625
ENSCAPP00000012651
annotation not available
      
 0.570
ENSCAPP00000013528
annotation not available
      
 0.549
PKNOX1
PBX/knotted 1 homeobox 1.
    
   0.540
ENSCAPP00000011864
annotation not available
      
 0.479
STK11
Serine/threonine kinase 11.
    
   0.466
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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