STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAPSCalcyphosine. (189 aa)    
Predicted Functional Partners:
TONSL
Tonsoku like, DNA repair protein.
    
  0.646
ZC2HC1B
Zinc finger C2HC-type containing 1B.
    
   0.622
WDR90
WD repeat domain 90.
    
 
 0.574
RIPK4
Receptor interacting serine/threonine kinase 4.
    
 0.572
PLA2G4A
Phospholipase A2 group IVA.
    
 0.564
LGR4
Leucine rich repeat containing G protein-coupled receptor 4.
    
 0.528
RXFP1
Relaxin family peptide receptor 1.
    
 0.528
RXFP2
Relaxin family peptide receptor 2.
    
 0.528
LGR5
Leucine rich repeat containing G protein-coupled receptor 5.
    
 0.528
PRTG
Protogenin.
    
 
 0.515
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.