Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SNX19Sorting nexin 19. (948 aa)    
Predicted Functional Partners:
PPT2
Palmitoyl-protein thioesterase 2.
      
 0.760
ENSCAPP00000012226
annotation not available
     
 0.760
EXT1
Exostosin glycosyltransferase 1.
      
 0.745
ENSCAPP00000007661
annotation not available
      
 0.690
INSL6
Insulin like 6.
      
 0.688
ENSCAPP00000018074
annotation not available
      
 0.688
CHRNA1
Cholinergic receptor nicotinic alpha 1 subunit.
      
 0.687
TBX5
T-box transcription factor 5.
      
 0.672
STARD3NL
STARD3 N-terminal like.
      
 0.646
SNX10
Sorting nexin 10.
     
 0.638
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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