STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZC2HC1BZinc finger C2HC-type containing 1B. (163 aa)    
Predicted Functional Partners:
ZDHHC22
Zinc finger DHHC-type containing 22.
      
 0.692
SEC22C
SEC22 homolog C, vesicle trafficking protein.
      
 0.690
FAM163B
Family with sequence similarity 163 member B.
      
 0.668
CAPS
Calcyphosine.
    
   0.622
CAPSL
Calcyphosine like.
    
   0.622
LRRTM2
Leucine rich repeat transmembrane neuronal 2.
      
 0.616
METTL25
Methyltransferase like 25.
    
 
 0.614
SEC22A
SEC22 homolog A, vesicle trafficking protein.
      
 0.454
ENSCAPP00000012357
annotation not available
      
 0.450
ENSCAPP00000004174
annotation not available
      
 0.440
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.