Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RNF14Ring finger protein 14. (468 aa)    
Predicted Functional Partners:
ENSCAPP00000007856
annotation not available
    
   0.878
UBE2D4
Ubiquitin conjugating enzyme E2 D4 (putative).
    
 0.845
GSPT1
G1 to S phase transition 1.
   
 
 0.830
UBE2L6
Ubiquitin conjugating enzyme E2 L6.
    
 0.731
ENSCAPP00000011901
annotation not available
    
 0.722
ENSCAPP00000002885
annotation not available
    
   0.713
ENSCAPP00000005158
annotation not available
    
 
 0.671
RNF126
Ring finger protein 126.
    
 
 0.652
UBE2B
Ubiquitin conjugating enzyme E2 B.
    
 0.573
ARIH1
Ariadne RBR E3 ubiquitin protein ligase 1.
     
 0.571
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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