STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACER1Alkaline ceramidase 1. (269 aa)    
Predicted Functional Partners:
ASAH2
N-acylsphingosine amidohydrolase 2.
    
 0.915
ENSCAPP00000006015
annotation not available
    
 0.910
GALC
Galactosylceramidase.
     
 0.908
SMPD1
Sphingomyelin phosphodiesterase 1.
     
 0.908
PLPP2
Phospholipid phosphatase 2.
     
 0.908
ASAH1
N-acylsphingosine amidohydrolase 1.
     
 0.906
ENSCAPP00000001863
annotation not available
    
 0.889
SMPD2
Sphingomyelin phosphodiesterase 2.
    
 0.872
CERS3
Ceramide synthase 3.
    
 0.869
CERS2
Ceramide synthase 2.
    
 0.867
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.