STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACER1Alkaline ceramidase 1. (269 aa)    
Predicted Functional Partners:
ASAH2
N-acylsphingosine amidohydrolase 2.
    
 0.978
CERS3
Ceramide synthase 3.
    
 0.968
ASAH1
N-acylsphingosine amidohydrolase 1.
     
 0.968
ENSCAPP00000006015
annotation not available
    
 0.962
CERS2
Ceramide synthase 2.
    
 0.957
SMPD2
Sphingomyelin phosphodiesterase 2.
    
 0.952
SPHK1
Sphingosine kinase 1.
    
 0.951
ENSCAPP00000002615
annotation not available
    
 0.950
UGCG
UDP-glucose ceramide glucosyltransferase.
     
 0.945
SGMS1
Sphingomyelin synthase 1.
     
 0.939
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.