STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000001641annotation not available (160 aa)    
Predicted Functional Partners:
SLC7A8
Solute carrier family 7 member 8.
   
  
 0.894
TNN
Tenascin N.
    
  0.754
TNC
Tenascin C.
    
  0.704
TNR
Tenascin R.
    
  0.704
ATP6V1H
ATPase H+ transporting V1 subunit H.
    
   0.622
SLC1A4
Solute carrier family 1 member 4.
    
 
 0.601
SLC1A1
Solute carrier family 1 member 1.
    
 
 0.598
SLC7A10
Solute carrier family 7 member 10.
   
  
 0.594
SLC7A5
Solute carrier family 7 member 5.
   
  
 0.575
SLC7A6
Solute carrier family 7 member 6.
      
 0.571
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.