Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000001651annotation not available (346 aa)    
Predicted Functional Partners:
PTP4A3
Protein tyrosine phosphatase 4A3.
    
 
 0.898
ENSCAPP00000000626
annotation not available
    
 
 0.850
ENSCAPP00000011741
annotation not available
    
 
 0.850
PTP4A1
Protein tyrosine phosphatase 4A1.
    
 
 0.850
GMPS
Guanine monophosphate synthase.
    
 0.758
ATIC
5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase.
    
 0.721
ARL15
ADP ribosylation factor like GTPase 15.
   
 
 0.716
NT5E
5'-nucleotidase ecto.
    
 0.696
ENKUR
Enkurin, TRPC channel interacting protein.
  
 
 0.573
APRT
Adenine phosphoribosyltransferase.
    
 0.522
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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