ENSCAPP00000001657 protein (Cavia aperea) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

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textmining

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experimentally determined

co-expression

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gene neighborhood

gene co-occurrence

gene fusions

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[Homology]

Score

ENSCAPP00000001657

annotation not available (270 aa)

Predicted Functional Partners:

ENSCAPP00000015859

0.807

ENSCAPP00000017840

0.793

GATM

0.758

ENSCAPP00000005674

0.669

TRMT11

0.624

RASSF5

0.569

FBXO11

0.502

SLC6A1

0.500

SLC6A9

0.500

SLC6A7

0.500

Your Current Organism:

Cavia aperea

NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSCAPP00000001657	ENSCAPP00000005674	ENSCAPP00000001657	ENSCAPP00000005674	annotation not available	annotation not available	0.669
ENSCAPP00000001657	ENSCAPP00000015859	ENSCAPP00000001657	ENSCAPP00000015859	annotation not available	annotation not available	0.807
ENSCAPP00000001657	ENSCAPP00000017840	ENSCAPP00000001657	ENSCAPP00000017840	annotation not available	annotation not available	0.793
ENSCAPP00000001657	FBXO11	ENSCAPP00000001657	ENSCAPP00000016493	annotation not available	F-box protein 11.	0.502
ENSCAPP00000001657	GATM	ENSCAPP00000001657	ENSCAPP00000009025	annotation not available	Glycine amidinotransferase.	0.758
ENSCAPP00000001657	RASSF5	ENSCAPP00000001657	ENSCAPP00000002791	annotation not available	Ras association domain family member 5.	0.569
ENSCAPP00000001657	SLC6A1	ENSCAPP00000001657	ENSCAPP00000001506	annotation not available	Solute carrier family 6 member 1.	0.500
ENSCAPP00000001657	SLC6A7	ENSCAPP00000001657	ENSCAPP00000017568	annotation not available	Solute carrier family 6 member 7.	0.500
ENSCAPP00000001657	SLC6A9	ENSCAPP00000001657	ENSCAPP00000008223	annotation not available	Solute carrier family 6 member 9.	0.500
ENSCAPP00000001657	TRMT11	ENSCAPP00000001657	ENSCAPP00000012767	annotation not available	tRNA methyltransferase 11 homolog.	0.624
ENSCAPP00000005674	ENSCAPP00000001657	ENSCAPP00000005674	ENSCAPP00000001657	annotation not available	annotation not available	0.669
ENSCAPP00000005674	ENSCAPP00000015859	ENSCAPP00000005674	ENSCAPP00000015859	annotation not available	annotation not available	0.878
ENSCAPP00000005674	SLC6A1	ENSCAPP00000005674	ENSCAPP00000001506	annotation not available	Solute carrier family 6 member 1.	0.713
ENSCAPP00000005674	SLC6A7	ENSCAPP00000005674	ENSCAPP00000017568	annotation not available	Solute carrier family 6 member 7.	0.708
ENSCAPP00000005674	SLC6A9	ENSCAPP00000005674	ENSCAPP00000008223	annotation not available	Solute carrier family 6 member 9.	0.911
ENSCAPP00000015859	ENSCAPP00000001657	ENSCAPP00000015859	ENSCAPP00000001657	annotation not available	annotation not available	0.807
ENSCAPP00000015859	ENSCAPP00000005674	ENSCAPP00000015859	ENSCAPP00000005674	annotation not available	annotation not available	0.878
ENSCAPP00000015859	SLC6A1	ENSCAPP00000015859	ENSCAPP00000001506	annotation not available	Solute carrier family 6 member 1.	0.500
ENSCAPP00000015859	SLC6A7	ENSCAPP00000015859	ENSCAPP00000017568	annotation not available	Solute carrier family 6 member 7.	0.500
ENSCAPP00000015859	SLC6A9	ENSCAPP00000015859	ENSCAPP00000008223	annotation not available	Solute carrier family 6 member 9.	0.500