STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
USP5Ubiquitin specific peptidase 5. (758 aa)    
Predicted Functional Partners:
UBA52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
 0.963
ENSCAPP00000010366
annotation not available
    
 0.963
ENSCAPP00000000492
annotation not available
    
 0.957
ENSCAPP00000004155
annotation not available
    
 0.957
ENSCAPP00000014462
annotation not available
    
 0.957
GNB3
G protein subunit beta 3.
      
 0.949
CDCA3
Cell division cycle associated 3.
      
 0.948
ENO2
Enolase 2.
   
  
 0.945
CACNA1H
Calcium voltage-gated channel subunit alpha1 H.
    
 
 0.851
SMURF1
SMAD specific E3 ubiquitin protein ligase 1.
    
 
 0.835
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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