Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RNASEH2ARibonuclease H2 subunit A. (189 aa)    
Predicted Functional Partners:
RNASEH2B
Ribonuclease H2 subunit B.
   
 0.999
FEN1
Flap structure-specific endonuclease 1.
  
 
 0.962
ENSCAPP00000002185
annotation not available
  
 
 0.957
ZBTB16
Zinc finger and BTB domain containing 16.
     
 0.956
PCNA
Proliferating cell nuclear antigen.
  
 
 0.956
POLE
DNA polymerase epsilon, catalytic subunit.
   
 
 0.954
SPRY4
Sprouty RTK signaling antagonist 4.
      
 0.949
RAD52
RAD52 homolog, DNA repair protein.
    
 
 0.938
TOP1
DNA topoisomerase I.
   
 
 0.932
GRIN3A
Glutamate ionotropic receptor NMDA type subunit 3A.
      
 0.922
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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