STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NR1H4Nuclear receptor subfamily 1 group H member 4. (414 aa)    
Predicted Functional Partners:
NCOA1
Nuclear receptor coactivator 1.
    
 0.983
NCOA2
Nuclear receptor coactivator 2.
    
 0.979
RXRA
Retinoid X receptor alpha.
   
 0.964
PPARGC1A
PPARG coactivator 1 alpha.
    
 0.956
NR0B2
Nuclear receptor subfamily 0 group B member 2.
   
 0.941
RXRB
Retinoid X receptor beta.
   
 0.928
NCOA3
Nuclear receptor coactivator 3.
    
 0.923
CYP7A1
Cytochrome P450 family 7 subfamily A member 1.
   
 0.921
ENSCAPP00000011708
annotation not available
    
 0.921
ENSCAPP00000013862
annotation not available
    
 0.921
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.