STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000001681annotation not available (135 aa)    
Predicted Functional Partners:
CDCA3
Cell division cycle associated 3.
      
 0.836
ENSCAPP00000004769
annotation not available
    
 0.779
ADH5
Alcohol dehydrogenase 5 (class III), chi polypeptide.
    
 0.779
SORD
Sorbitol dehydrogenase.
    
 0.761
TKTL2
Transketolase like 2.
    
  0.676
TKTL1
Transketolase like 1.
    
  0.676
TKT
Transketolase.
    
  0.676
RBM45
RNA binding motif protein 45.
     
  0.659
PGD
Phosphogluconate dehydrogenase.
     
  0.659
CBX1
Chromobox 1.
      
 0.656
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.