Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000001689annotation not available (76 aa)    
Predicted Functional Partners:
TMED10
Transmembrane p24 trafficking protein 10.
   
 0.999
TMED3
Transmembrane p24 trafficking protein 3.
   
 0.991
ENSCAPP00000016386
annotation not available
   
 0.991
SURF4
Surfeit 4.
   
 0.969
ENSCAPP00000014804
annotation not available
   
 
 0.966
GORASP2
Golgi reassembly stacking protein 2.
   
 0.953
LMAN2
Lectin, mannose binding 2.
   
 0.951
SEC13
SEC13 homolog, nuclear pore and COPII coat complex component.
    
 0.950
GOLGB1
Golgin B1.
    
  0.945
ENSCAPP00000007183
annotation not available
   
 
 0.939
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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