Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
UNC13DUnc-13 homolog D. (1011 aa)    
Predicted Functional Partners:
ENSCAPP00000008916
annotation not available
      
 0.932
STXBP2
Syntaxin binding protein 2.
      
 0.926
RAB27A
RAB27A, member RAS oncogene family.
    
 
 0.702
RAB27B
RAB27B, member RAS oncogene family.
    
 
 0.674
TNFSF11
TNF superfamily member 11.
      
 0.594
STXBP1
Syntaxin binding protein 1.
      
 0.582
EIPR1
EARP complex and GARP complex interacting protein 1.
      
 0.579
HID1
HID1 domain containing.
      
 0.571
CTXN3
Cortexin 3.
      
 0.571
AP3B1
Adaptor related protein complex 3 subunit beta 1.
      
 0.567
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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