STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NAIF1Nuclear apoptosis inducing factor 1. (327 aa)    
Predicted Functional Partners:
SNX15
Sorting nexin 15.
   
 0.947
RPS6KC1
Ribosomal protein S6 kinase C1.
   
 0.945
ENSCAPP00000011016
annotation not available
   
 0.942
VPS16
VPS16 core subunit of CORVET and HOPS complexes.
    
 0.939
INTS5
Integrator complex subunit 5.
    
   0.935
INTS6
Integrator complex subunit 6.
    
   0.935
INTS3
Integrator complex subunit 3.
    
   0.935
VPS41
VPS41 subunit of HOPS complex.
    
 0.931
GOSR1
Golgi SNAP receptor complex member 1.
    
 0.927
VPS18
VPS18 core subunit of CORVET and HOPS complexes.
    
 0.927
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.