Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SLC46A1Solute carrier family 46 member 1. (390 aa)    
Predicted Functional Partners:
MFRP
Membrane frizzled-related protein.
   
 
 0.949
ENSCAPP00000012046
annotation not available
   
   0.902
ENSCAPP00000005630
annotation not available
     
 0.777
ENSCAPP00000013308
annotation not available
      
 0.717
ENSCAPP00000005302
annotation not available
     
  0.714
SLC22A4
Solute carrier family 22 member 4.
    
 0.709
GOSR1
Golgi SNAP receptor complex member 1.
      
 0.704
CPD
Carboxypeptidase D.
      
 0.697
FOLR1
Folate receptor alpha.
      
 0.691
SLC29A3
Solute carrier family 29 member 3.
      
 0.691
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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