Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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Co-expression
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[Homology]
Score
RBM12BRNA binding motif protein 12B. (952 aa)    
Predicted Functional Partners:
GSPT1
G1 to S phase transition 1.
    
 
 0.889
WAC
WW domain containing adaptor with coiled-coil.
    
   0.835
YLPM1
YLP motif containing 1.
   
  
 0.779
ENSCAPP00000003178
annotation not available
     
  0.678
GOT2
Glutamic-oxaloacetic transaminase 2.
     
  0.678
CPNE3
Copine 3.
   
 
 0.667
ADK
Adenosine kinase.
    
   0.626
RAD23A
RAD23 homolog A, nucleotide excision repair protein.
    
 0.602
ASB12
Ankyrin repeat and SOCS box containing 12.
    
 
 0.598
UBE2O
Ubiquitin conjugating enzyme E2 O.
    
 
 0.576
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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