STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RBM12BRNA binding motif protein 12B. (952 aa)    
Predicted Functional Partners:
GSPT1
G1 to S phase transition 1.
    
 
 0.770
RAD23A
RAD23 homolog A, nucleotide excision repair protein.
    
 0.575
YLPM1
YLP motif containing 1.
      
 0.557
RLIM
Ring finger protein, LIM domain interacting.
   
  
 0.532
ASB12
Ankyrin repeat and SOCS box containing 12.
      
 0.525
ENSCAPP00000001157
annotation not available
    
  0.448
SIDT2
SID1 transmembrane family member 2.
    
  0.448
SIDT1
SID1 transmembrane family member 1.
    
  0.448
KPRP
Keratinocyte proline rich protein.
    
  0.448
DAZAP1
DAZ associated protein 1.
   
 
 0.443
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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