STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000001708annotation not available (203 aa)    
Predicted Functional Partners:
NODAL
Nodal growth differentiation factor.
  
 
 0.902
ENSCAPP00000013126
annotation not available
     
 0.807
TGFB3
Transforming growth factor beta 3.
     
 0.807
ENSCAPP00000013524
annotation not available
     
 0.805
ACVR1B
Activin A receptor type 1B.
    
 0.729
ACVR2B
Activin A receptor type 2B.
    
 0.699
CHRD
Chordin.
    
 0.667
TGFBR1
Transforming growth factor beta receptor 1.
    
 0.642
ACVR1
Activin A receptor type 1.
    
 0.640
ACVR1C
Activin A receptor type 1C.
    
 0.639
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.