STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000001712annotation not available (540 aa)    
Predicted Functional Partners:
PSAT1
Phosphoserine aminotransferase 1.
     
 0.768
AGXT
Alanine--glyoxylate and serine--pyruvate aminotransferase.
    
 0.756
NADK
NAD kinase.
   
 
  0.749
ENSCAPP00000005732
annotation not available
    
 0.717
NUDT12
Nudix hydrolase 12.
   
 0.707
ALPL
Alkaline phosphatase, biomineralization associated.
  
  
 
0.692
SHMT1
Serine hydroxymethyltransferase 1.
    
  0.690
SHMT2
Serine hydroxymethyltransferase 2.
    
  0.690
ACP7
Acid phosphatase 7, tartrate resistant (putative).
  
 
 0.681
CPPED1
Calcineurin like phosphoesterase domain containing 1.
    
 0.619
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.