STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000001714annotation not available (110 aa)    
Predicted Functional Partners:
ENSCAPP00000000270
annotation not available
   
 0.995
ENSCAPP00000006586
annotation not available
   
 0.995
ENSCAPP00000013350
annotation not available
   
 0.995
HAT1
Histone acetyltransferase 1.
   
 0.947
SUZ12
SUZ12 polycomb repressive complex 2 subunit.
    
 0.942
ENSCAPP00000001550
annotation not available
    
 0.937
ENSCAPP00000013913
annotation not available
    
 0.937
CHAF1B
Chromatin assembly factor 1 subunit B.
   
 0.928
LIN9
Lin-9 DREAM MuvB core complex component.
    
 0.922
LIN37
Lin-37 DREAM MuvB core complex component.
    
 0.922
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.