STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLC15A3Solute carrier family 15 member 3. (416 aa)    
Predicted Functional Partners:
SLC8A1
Solute carrier family 8 member A1.
      
 0.667
TNFRSF21
TNF receptor superfamily member 21.
      
 0.657
NADK
NAD kinase.
     
  0.646
SLC47A1
Solute carrier family 47 member 1.
   
 
 0.626
ST3GAL6
ST3 beta-galactoside alpha-2,3-sialyltransferase 6.
      
 0.622
ENSCAPP00000017989
annotation not available
    
   0.621
EHD1
EH domain containing 1.
      
 0.569
ARHGAP17
Rho GTPase activating protein 17.
      
 0.568
CD6
CD6 molecule.
      
 0.568
BAIAP2
BAR/IMD domain containing adaptor protein 2.
      
 0.568
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.