Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
E2F6E2F transcription factor 6. (268 aa)    
Predicted Functional Partners:
TFDP2
Transcription factor Dp-2.
  
 0.998
L3MBTL2
L3MBTL histone methyl-lysine binding protein 2.
    
 0.998
TFDP1
Transcription factor Dp-1.
   
 0.997
MGA
MAX dimerization protein MGA.
    
 0.996
PCGF1
Polycomb group ring finger 1.
    
 0.995
WDR5
WD repeat domain 5.
    
 0.994
MAX
MYC associated factor X.
    
 0.993
ENSCAPP00000011556
annotation not available
   
 0.990
RYBP
RING1 and YY1 binding protein.
   
 0.990
ENSCAPP00000009463
annotation not available
    
 0.986
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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