Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GBE11,4-alpha-glucan branching enzyme 1. (591 aa)    
Predicted Functional Partners:
GYS1
Glycogen synthase 1.
  
 0.999
GYS2
Glycogen synthase 2.
  
 0.998
GYG1
Glycogenin 1.
   
 0.998
AGL
Amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase.
  
 0.998
PYGL
Glycogen phosphorylase L.
  
 0.987
PYGB
Glycogen phosphorylase B.
  
 0.976
PYGM
Glycogen phosphorylase, muscle associated.
  
 0.976
UGP2
UDP-glucose pyrophosphorylase 2.
   
 
 0.949
CTU2
Cytosolic thiouridylase subunit 2.
   
 0.935
PIGA
Phosphatidylinositol glycan anchor biosynthesis class A.
  
 0.932
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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