STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000001732annotation not available (143 aa)    
Predicted Functional Partners:
RAB8A
RAB8A, member RAS oncogene family.
    
 0.986
ENSCAPP00000016117
annotation not available
    
 0.963
ENSCAPP00000005436
annotation not available
    
 0.957
ENSCAPP00000006409
annotation not available
    
 0.933
RAB8B
RAB8B, member RAS oncogene family.
    
 0.930
ENSCAPP00000004998
annotation not available
    
 0.874
EXOC6
Exocyst complex component 6.
    
 0.867
RAB25
RAB25, member RAS oncogene family.
    
 0.861
EXOC5
Exocyst complex component 5.
    
 0.851
ENSCAPP00000002351
annotation not available
    
 0.843
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
Server load: low (32%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.