STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLC22A23Solute carrier family 22 member 23. (558 aa)    
Predicted Functional Partners:
TMC6
Transmembrane channel like 6.
    
 
 0.829
SLC22A18
Solute carrier family 22 member 18.
    
 0.751
LCN2
Lipocalin 2.
     
 0.746
RPAP3
RNA polymerase II associated protein 3.
    
 0.743
ENSCAPP00000017621
annotation not available
      
 0.741
PLA2G4A
Phospholipase A2 group IVA.
    
 0.737
RASA1
RAS p21 protein activator 1.
      
 0.611
INTS1
Integrator complex subunit 1.
    
 0.607
TAX1BP1
Tax1 binding protein 1.
    
   0.604
INTS9
Integrator complex subunit 9.
    
 0.603
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.