Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ESS2Ess-2 splicing factor homolog. (414 aa)    
Predicted Functional Partners:
PRPF19
pre-mRNA processing factor 19.
    
 0.973
CRNKL1
Crooked neck pre-mRNA splicing factor 1.
    
 0.969
BUD31
BUD31 homolog.
    
 0.963
SYF2
SYF2 pre-mRNA splicing factor.
    
 0.960
XAB2
XPA binding protein 2.
    
 0.960
ENSCAPP00000011831
annotation not available
    
 0.957
PRPF8
pre-mRNA processing factor 8.
    
 0.951
ENSCAPP00000002778
annotation not available
   
 0.938
SNRPF
Small nuclear ribonucleoprotein polypeptide F.
    
 0.936
CDC5L
Cell division cycle 5 like.
    
 0.933
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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