STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GRIFINGalectin-related inter-fiber protein. (144 aa)    
Predicted Functional Partners:
CRYBA4
Crystallin beta A4.
   
  
 0.700
PLEKHG3
Pleckstrin homology and RhoGEF domain containing G3.
      
 0.680
ENSCAPP00000017174
annotation not available
      
 0.662
RNF10
Ring finger protein 10.
      
 0.658
CRYGN
Crystallin gamma N.
   
 
 0.621
LGSN
Lengsin, lens protein with glutamine synthetase domain.
   
  
 0.616
WDR17
WD repeat domain 17.
    
 
 0.603
PLEKHH3
Pleckstrin homology, MyTH4 and FERM domain containing H3.
      
 0.602
ENSCAPP00000008760
annotation not available
      
 0.599
ENSCAPP00000001225
annotation not available
   
 
 0.594
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.