STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GRIFINGalectin-related inter-fiber protein. (144 aa)    
Predicted Functional Partners:
DCN
Decorin.
      
 0.578
ENSCAPP00000011440
annotation not available
      
 0.578
RHO
Rhodopsin.
      
 0.578
PLEKHG3
Pleckstrin homology and RhoGEF domain containing G3.
      
 0.559
CRYBA4
Crystallin beta A4.
      
 0.559
RNF10
Ring finger protein 10.
      
 0.557
CA3
Carbonic anhydrase 3.
      
 0.520
RPE65
Retinoid isomerohydrolase RPE65.
      
 0.520
ENSCAPP00000003170
annotation not available
      
 0.519
WDR17
WD repeat domain 17.
    
 
 0.493
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.