Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000001745annotation not available (194 aa)    
Predicted Functional Partners:
RAB10
RAB10, member RAS oncogene family.
    
 0.995
RAB8A
RAB8A, member RAS oncogene family.
    
 0.955
RAB29
RAB29, member RAS oncogene family.
      
 0.949
ENSCAPP00000000322
annotation not available
      
 0.920
PIP4P1
Phosphatidylinositol-4,5-bisphosphate 4-phosphatase 1.
    
 
 0.906
ENSCAPP00000012309
annotation not available
      
 0.903
GALNT9
Polypeptide N-acetylgalactosaminyltransferase 9.
      
 0.896
RAB8B
RAB8B, member RAS oncogene family.
    
 0.894
RAB12
RAB12, member RAS oncogene family.
    
 0.879
PHKB
Phosphorylase kinase regulatory subunit beta.
    
   0.840
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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