STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000001745annotation not available (194 aa)    
Predicted Functional Partners:
RAB10
RAB10, member RAS oncogene family.
    
 0.825
RAB8A
RAB8A, member RAS oncogene family.
    
 0.780
RAB7B
RAB7B, member RAS oncogene family.
    
 0.764
RAB9A
RAB9A, member RAS oncogene family.
    
 0.756
DYNC1LI1
Dynein cytoplasmic 1 light intermediate chain 1.
     
 0.684
OSBPL1A
Oxysterol binding protein like 1A.
   
 0.659
OSBPL2
Oxysterol binding protein like 2.
   
 0.659
RAB7A
RAB7A, member RAS oncogene family.
    
 0.643
RAB8B
RAB8B, member RAS oncogene family.
    
 0.633
RAB12
RAB12, member RAS oncogene family.
    
 0.631
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.