STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FUSFUS RNA binding protein. (333 aa)    
Predicted Functional Partners:
TNPO1
Transportin 1.
    
 
 0.965
ENSCAPP00000017572
annotation not available
   
 0.864
TARDBP
TAR DNA binding protein.
   
 0.861
ENSCAPP00000006614
annotation not available
   
 0.854
SRSF10
Serine and arginine rich splicing factor 10.
   
 0.840
ILF3
Interleukin enhancer binding factor 3.
   
 
 0.806
HNRNPAB
Heterogeneous nuclear ribonucleoprotein A/B.
   
 0.770
PRMT1
Protein arginine methyltransferase 1.
   
 
 0.765
YBX1
Y-box binding protein 1.
    
 0.763
HNRNPM
Heterogeneous nuclear ribonucleoprotein M.
   
 0.761
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.