STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARFGEF3ARFGEF family member 3. (2089 aa)    
Predicted Functional Partners:
PHB2
Prohibitin 2.
    
 
 0.795
CCDC167
Coiled-coil domain containing 167.
      
 0.555
LRRTM4
Leucine rich repeat transmembrane neuronal 4.
      
 0.548
DRG2
Developmentally regulated GTP binding protein 2.
      
 0.532
ORC5
Origin recognition complex subunit 5.
      
 0.521
KCNH7
Potassium voltage-gated channel subfamily H member 7.
      
 0.517
PHB
Prohibitin.
    
 
 0.517
STOML1
Stomatin like 1.
    
 
 0.425
STOM
Stomatin.
    
 
 0.425
STOML2
Stomatin like 2.
    
 
 0.425
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.