STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TWF2Twinfilin actin binding protein 2. (348 aa)    
Predicted Functional Partners:
CAPZB
Capping actin protein of muscle Z-line subunit beta.
   
 0.981
ENSCAPP00000004593
annotation not available
   
 
 0.977
CAP2
Cyclase associated actin cytoskeleton regulatory protein 2.
   
 
 0.976
TMOD3
Tropomodulin 3.
   
 0.962
BCL7A
BAF chromatin remodeling complex subunit BCL7A.
    
   0.946
WDR82
WD repeat domain 82.
 
   
  0.905
CAPZA1
Capping actin protein of muscle Z-line subunit alpha 1.
   
 0.896
UTP6
UTP6 small subunit processome component.
    
   0.893
EPS8L2
EPS8 like 2.
     
 0.882
EPS8
Epidermal growth factor receptor pathway substrate 8.
     
 0.874
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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