Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MTRES1Mitochondrial transcription rescue factor 1. (243 aa)    
Predicted Functional Partners:
C12orf65
Chromosome 12 open reading frame 65.
    
 0.951
MRPL58
Mitochondrial ribosomal protein L58.
    
 0.872
ENSCAPP00000004394
annotation not available
   
 0.858
MRPL3
Mitochondrial ribosomal protein L3.
   
  0.844
MRPL28
Mitochondrial ribosomal protein L28.
   
 0.843
MRPL18
Mitochondrial ribosomal protein L18.
   
  0.839
ENSCAPP00000012139
annotation not available
   
 0.835
MRPL13
Mitochondrial ribosomal protein L13.
   
  0.834
MRPL50
Mitochondrial ribosomal protein L50.
   
  0.832
ENSCAPP00000012094
annotation not available
    
 0.832
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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