Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RSPH1Radial spoke head component 1. (226 aa)    
Predicted Functional Partners:
ENSCAPP00000011763
annotation not available
   
 0.999
RSPH9
Radial spoke head component 9.
   
 0.998
ENSCAPP00000008654
annotation not available
   
 0.998
ENSCAPP00000000860
annotation not available
   
 0.995
NME5
NME/NM23 family member 5.
   
 0.993
IQUB
IQ motif and ubiquitin domain containing.
   
 0.992
ROPN1L
Rhophilin associated tail protein 1 like.
   
 0.989
DNAJB13
DnaJ heat shock protein family (Hsp40) member B13.
   
 0.988
ENSCAPP00000011374
annotation not available
   
 0.988
CFAP61
Cilia and flagella associated protein 61.
    
 0.978
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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